HL_9RTU_083

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9RTU|1|a|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTU_083 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.3367

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9RTU|1|a|G|462
9RTU|1|a|U|463
9RTU|1|a|U|464
9RTU|1|a|A|465
9RTU|1|a|A|466
9RTU|1|a|U|467
9RTU|1|a|A|468
9RTU|1|a|C|469
9RTU|1|a|C|470

Current chains

Chain a

16S ribosomal RNA

Nearby chains