HL_9RTU_106
3D structure
- PDB id
- 9RTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RTU_106 not in the Motif Atlas
- Geometric match to HL_7K16_002
- Geometric discrepancy: 0.2275
- The information below is about HL_7K16_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9RTU|1|w|G|30
9RTU|1|w|A|31
9RTU|1|w|PSU|32
9RTU|1|w|U|33
9RTU|1|w|G|34
9RTU|1|w|A|35
9RTU|1|w|A|36
9RTU|1|w|MIA|37
9RTU|1|w|A|38
9RTU|1|w|PSU|39
9RTU|1|w|C|40
Current chains
- Chain w
- A/P-site tRNA(Phe)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain x
- Elongation factor G
- Chain z
- mRNA
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