HL_9RU6_009
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GCGACAAAC
- Length
- 9 nucleotides
- Bulged bases
- 9RU6|1|A|A|1991, 9RU6|1|A|A|1994
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RU6_009 not in the Motif Atlas
- Geometric match to HL_9E6Q_025
- Geometric discrepancy: 0.2134
- The information below is about HL_9E6Q_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28253.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9RU6|1|A|G|1988
9RU6|1|A|C|1989
9RU6|1|A|G|1990
9RU6|1|A|A|1991
9RU6|1|A|C|1992
9RU6|1|A|A|1993
9RU6|1|A|A|1994
9RU6|1|A|A|1995
9RU6|1|A|C|1996
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: