HL_9RU6_064
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- ACUUAUAUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RU6_064 not in the Motif Atlas
- Homologous match to HL_9MTS_102
- Geometric discrepancy: 0.1051
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9RU6|1|Ax|A|31
9RU6|1|Ax|C|32
9RU6|1|Ax|U|33
9RU6|1|Ax|U|34
9RU6|1|Ax|A|35
9RU6|1|Ax|U|36
9RU6|1|Ax|A|37
9RU6|1|Ax|U|38
9RU6|1|Ax|U|39
Current chains
- Chain Ax
- P-site RNA (70-MER)
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain Az
- mRNA (34-MER)
Coloring options: