HL_9RU7_036

3D structure

PDB id

9RU7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUAAUUAAAA

Length

11 nucleotides

Bulged bases

9RU7|1|L5|A|3642, 9RU7|1|L5|A|3643, 9RU7|1|L5|U|3644, 9RU7|1|L5|A|3648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU7|1|L5|U|3639
9RU7|1|L5|U|3640
9RU7|1|L5|U|3641
9RU7|1|L5|A|3642
9RU7|1|L5|A|3643
9RU7|1|L5|U|3644
9RU7|1|L5|U|3645
9RU7|1|L5|A|3646
9RU7|1|L5|A|3647
9RU7|1|L5|A|3648
9RU7|1|L5|A|3649

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

Large ribosomal subunit protein uL2

Chain Lj

Large ribosomal subunit protein eL37