HL_9RU8_016

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|L5|C|1436
9RU8|1|L5|C|1437
9RU8|1|L5|U|1438
9RU8|1|L5|C|1439
9RU8|1|L5|U|1440
9RU8|1|L5|C|1441
9RU8|1|L5|C|1442
9RU8|1|L5|A|1443
9RU8|1|L5|G|1444
9RU8|1|L5|U|1445
9RU8|1|L5|C|1446
9RU8|1|L5|C|1447
9RU8|1|L5|G|1448

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

Large ribosomal subunit protein uL30

Chain LQ

60S ribosomal protein L18

Chain Lb

Large ribosomal subunit protein eL29