HL_9RU8_059

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

C(PSU)GAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

9RU8|1|L5|G|4694, 9RU8|1|L5|C|4698

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|L5|C|4688
9RU8|1|L5|PSU|4689
9RU8|1|L5|G|4690
9RU8|1|L5|A|4691
9RU8|1|L5|A|4692
9RU8|1|L5|C|4693
9RU8|1|L5|G|4694
9RU8|1|L5|C|4695
9RU8|1|L5|C|4696
9RU8|1|L5|U|4697
9RU8|1|L5|C|4698
9RU8|1|L5|U|4699
9RU8|1|L5|A|4700
9RU8|1|L5|A|4701
9RU8|1|L5|G|4702

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein L9

Chain LO

60S ribosomal protein L13a

Chain Lm

Ubiquitin-60S ribosomal protein L40