3D structure

PDB id
9RU8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GUCGCCGUGCC
Length
11 nucleotides
Bulged bases
9RU8|1|S2|G|385
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RU8|1|S2|G|377
9RU8|1|S2|U|378
9RU8|1|S2|C|379
9RU8|1|S2|G|380
9RU8|1|S2|C|381
9RU8|1|S2|C|382
9RU8|1|S2|G|383
9RU8|1|S2|U|384
9RU8|1|S2|G|385
9RU8|1|S2|C|386
9RU8|1|S2|C|387

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SI
40S ribosomal protein S8
Chain SL
Small ribosomal subunit protein uS17

Coloring options:

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