HL_9RU8_076

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9RU8|1|S2|C|450, 9RU8|1|S2|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|S2|C|441
9RU8|1|S2|C|442
9RU8|1|S2|U|443
9RU8|1|S2|G|444
9RU8|1|S2|A|445
9RU8|1|S2|G|446
9RU8|1|S2|A|447
9RU8|1|S2|A|448
9RU8|1|S2|A|449
9RU8|1|S2|C|450
9RU8|1|S2|G|451
9RU8|1|S2|G|452

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8

Chain SY

40S ribosomal protein S24