HL_9RU8_079

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACU(PSU)(PSU)AA(A2M)UCCUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|S2|A|569
9RU8|1|S2|C|570
9RU8|1|S2|U|571
9RU8|1|S2|PSU|572
9RU8|1|S2|PSU|573
9RU8|1|S2|A|574
9RU8|1|S2|A|575
9RU8|1|S2|A2M|576
9RU8|1|S2|U|577
9RU8|1|S2|C|578
9RU8|1|S2|C|579
9RU8|1|S2|U|580
9RU8|1|S2|U|581

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24