HL_9RUA_079

3D structure

PDB id

9RUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACU(PSU)(PSU)AA(A2M)UCCUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUA|1|S2|A|569
9RUA|1|S2|C|570
9RUA|1|S2|U|571
9RUA|1|S2|PSU|572
9RUA|1|S2|PSU|573
9RUA|1|S2|A|574
9RUA|1|S2|A|575
9RUA|1|S2|A2M|576
9RUA|1|S2|U|577
9RUA|1|S2|C|578
9RUA|1|S2|C|579
9RUA|1|S2|U|580
9RUA|1|S2|U|581

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24