HL_9RUA_091

3D structure

PDB id

9RUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RUA_091 not in the Motif Atlas

Homologous match to HL_9PN5_106

Geometric discrepancy: 0.3937

The information below is about HL_9PN5_106

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27656.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9RUA|1|S2|C|1460
9RUA|1|S2|G|1461
9RUA|1|S2|U|1462
9RUA|1|S2|U|1463
9RUA|1|S2|C|1464
9RUA|1|S2|A|1465
9RUA|1|S2|G|1466

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SR

40S ribosomal protein S17