HL_9RUA_093

3D structure

PDB id

9RUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUGCAAUUAU(PSU)

Length

12 nucleotides

Bulged bases

9RUA|1|S2|U|1621, 9RUA|1|S2|U|1622, 9RUA|1|S2|A|1623

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUA|1|S2|A|1614
9RUA|1|S2|U|1615
9RUA|1|S2|U|1616
9RUA|1|S2|G|1617
9RUA|1|S2|C|1618
9RUA|1|S2|A|1619
9RUA|1|S2|A|1620
9RUA|1|S2|U|1621
9RUA|1|S2|U|1622
9RUA|1|S2|A|1623
9RUA|1|S2|U|1624
9RUA|1|S2|PSU|1625

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain SS

Small ribosomal subunit protein uS13

Chain Sd

40S ribosomal protein S29