HL_9RUC_036

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGCAGCAG

Length

8 nucleotides

Bulged bases

9RUC|1|L5|C|2794, 9RUC|1|L5|G|2796, 9RUC|1|L5|A|2798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUC|1|L5|C|2792
9RUC|1|L5|G|2793
9RUC|1|L5|C|2794
9RUC|1|L5|A|2795
9RUC|1|L5|G|2796
9RUC|1|L5|C|2797
9RUC|1|L5|A|2798
9RUC|1|L5|G|2799

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LP

Large ribosomal subunit protein uL22

Chain Lj

Large ribosomal subunit protein eL37

Chain Ll

60S ribosomal protein L39