HL_9RUC_074

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

9RUC|1|S2|C|450, 9RUC|1|S2|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUC|1|S2|C|441
9RUC|1|S2|C|442
9RUC|1|S2|U|443
9RUC|1|S2|G|444
9RUC|1|S2|A|445
9RUC|1|S2|G|446
9RUC|1|S2|A|447
9RUC|1|S2|A|448
9RUC|1|S2|A|449
9RUC|1|S2|C|450
9RUC|1|S2|G|451
9RUC|1|S2|G|452

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8

Chain SY

40S ribosomal protein S24