HL_9RUC_080
3D structure
- PDB id
- 9RUC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RUC|1|S2|A|957
9RUC|1|S2|G|958
9RUC|1|S2|G|959
9RUC|1|S2|U|960
9RUC|1|S2|G|961
9RUC|1|S2|A|962
9RUC|1|S2|A|963
9RUC|1|S2|A|964
9RUC|1|S2|U|965
9RUC|1|S2|U|966
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain S6
- Transfer RNA; tRNA
- Chain SB
- 40S ribosomal protein S3a
- Chain SF
- 40S ribosomal protein S5
- Chain SO
- 40S ribosomal protein S14
- Chain mR
- Histone H2B mRNA
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