HL_9RVC_074

3D structure

PDB id

9RVC (explore in PDB, NAKB, or RNA 3D Hub)

Description

staphylococcus aureus 70S initiation complex with natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGUGCGAUUGGAUUGCAC

Length

19 nucleotides

Bulged bases

9RVC|1|a|G|1496, 9RVC|1|a|A|1497, 9RVC|1|a|U|1498, 9RVC|1|a|U|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RVC|1|a|G|1490
9RVC|1|a|C|1491
9RVC|1|a|G|1492
9RVC|1|a|U|1493
9RVC|1|a|G|1494
9RVC|1|a|C|1495
9RVC|1|a|G|1496
9RVC|1|a|A|1497
9RVC|1|a|U|1498
9RVC|1|a|U|1499
9RVC|1|a|G|1500
9RVC|1|a|G|1501
9RVC|1|a|A|1502
9RVC|1|a|U|1503
9RVC|1|a|U|1504
9RVC|1|a|G|1505
9RVC|1|a|C|1506
9RVC|1|a|A|1507
9RVC|1|a|C|1508

Current chains

Chain a

23S rRNA

Nearby chains

Chain m

Large ribosomal subunit protein bL17