HL_9RVC_076

3D structure

PDB id

9RVC (explore in PDB, NAKB, or RNA 3D Hub)

Description

staphylococcus aureus 70S initiation complex with natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGAAGACAUUGAGUCUUCGAGU

Length

23 nucleotides

Bulged bases

9RVC|1|a|A|1575, 9RVC|1|a|A|1576, 9RVC|1|a|G|1583, 9RVC|1|a|G|1585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RVC|1|a|G|1572
9RVC|1|a|A|1573
9RVC|1|a|G|1574
9RVC|1|a|A|1575
9RVC|1|a|A|1576
9RVC|1|a|G|1577
9RVC|1|a|A|1578
9RVC|1|a|C|1579
9RVC|1|a|A|1580
9RVC|1|a|U|1581
9RVC|1|a|U|1582
9RVC|1|a|G|1583
9RVC|1|a|A|1584
9RVC|1|a|G|1585
9RVC|1|a|U|1586
9RVC|1|a|C|1587
9RVC|1|a|U|1588
9RVC|1|a|U|1589
9RVC|1|a|C|1590
9RVC|1|a|G|1591
9RVC|1|a|A|1592
9RVC|1|a|G|1593
9RVC|1|a|U|1594

Current chains

Chain a

23S rRNA

Nearby chains