HL_9S3B_096

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|S2|A|957
9S3B|1|S2|G|958
9S3B|1|S2|G|959
9S3B|1|S2|U|960
9S3B|1|S2|G|961
9S3B|1|S2|A|962
9S3B|1|S2|A|963
9S3B|1|S2|A|964
9S3B|1|S2|U|965
9S3B|1|S2|U|966

Current chains

Chain S2

18S rRNA

Nearby chains

Chain CM

58 amino acid ARF1-linker - V5 peptide - hCMV staller mRNA

Chain SF

40S ribosomal protein S5

Chain SO

40S ribosomal protein S14