HL_9S3B_109

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

9S3B|1|S2|U|1621, 9S3B|1|S2|U|1622, 9S3B|1|S2|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|S2|A|1614
9S3B|1|S2|U|1615
9S3B|1|S2|U|1616
9S3B|1|S2|G|1617
9S3B|1|S2|C|1618
9S3B|1|S2|A|1619
9S3B|1|S2|A|1620
9S3B|1|S2|U|1621
9S3B|1|S2|U|1622
9S3B|1|S2|A|1623
9S3B|1|S2|U|1624
9S3B|1|S2|U|1625

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19

Chain Sd

40S ribosomal protein S29