HL_9S3C_053
3D structure
- PDB id
- 9S3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 9S3C|1|L5|A|3876, 9S3C|1|L5|A|3877, 9S3C|1|L5|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S3C_053 not in the Motif Atlas
- Homologous match to HL_8GLP_055
- Geometric discrepancy: 0.0573
- The information below is about HL_8GLP_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.4
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9S3C|1|L5|G|3873
9S3C|1|L5|G|3874
9S3C|1|L5|G|3875
9S3C|1|L5|A|3876
9S3C|1|L5|A|3877
9S3C|1|L5|C|3878
9S3C|1|L5|G|3879
9S3C|1|L5|G|3880
9S3C|1|L5|G|3881
9S3C|1|L5|C|3882
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain Le
- 60S ribosomal protein L32
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