HL_9S3C_096
3D structure
- PDB id
- 9S3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S3C_096 not in the Motif Atlas
- Homologous match to HL_9H3G_093
- Geometric discrepancy: 0.134
- The information below is about HL_9H3G_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9S3C|1|S2|A|957
9S3C|1|S2|G|958
9S3C|1|S2|G|959
9S3C|1|S2|U|960
9S3C|1|S2|G|961
9S3C|1|S2|A|962
9S3C|1|S2|A|963
9S3C|1|S2|A|964
9S3C|1|S2|U|965
9S3C|1|S2|U|966
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain CM
- 58 amino acid ARF1-linker - V5 peptide - hCMV staller mRNA
- Chain SF
- 40S ribosomal protein S5
- Chain SO
- 40S ribosomal protein S14
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