HL_9S7B_064
3D structure
- PDB id
- 9S7B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S7B_064 not in the Motif Atlas
- Homologous match to HL_4V9Q_215
- Geometric discrepancy: 0.2139
- The information below is about HL_4V9Q_215
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.7
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
9S7B|1|Ax|G|53
9S7B|1|Ax|U|54
9S7B|1|Ax|U|55
9S7B|1|Ax|C|56
9S7B|1|Ax|A|57
9S7B|1|Ax|A|58
9S7B|1|Ax|U|59
9S7B|1|Ax|U|60
9S7B|1|Ax|C|61
Current chains
- Chain Ax
- P-site tRNA (Visualisation example)
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL33m
- Chain 8
- Large ribosomal subunit protein mL40
- Chain q
- Large ribosomal subunit protein mL64
Coloring options: