HL_9S7C_024

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUAA(1MA)UAG

Length

9 nucleotides

Bulged bases

9S7C|1|A|U|2618

QA status

Modified nucleotides: 1MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7C_024 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.2073

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33350.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9S7C|1|A|C|2612
9S7C|1|A|U|2613
9S7C|1|A|U|2614
9S7C|1|A|A|2615
9S7C|1|A|A|2616
9S7C|1|A|1MA|2617
9S7C|1|A|U|2618
9S7C|1|A|A|2619
9S7C|1|A|G|2620

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain L

Large ribosomal subunit protein uL14m