HL_9S7C_051

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCACAG

Length

6 nucleotides

Bulged bases

9S7C|1|AA|C|504, 9S7C|1|AA|A|507

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7C_051 not in the Motif Atlas

Geometric match to HL_5E08_001

Geometric discrepancy: 0.3484

The information below is about HL_5E08_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.4

Basepair signature

cWW-F-F

Number of instances in this motif group

20

Unit IDs

9S7C|1|AA|C|503
9S7C|1|AA|C|504
9S7C|1|AA|A|505
9S7C|1|AA|C|506
9S7C|1|AA|A|507
9S7C|1|AA|G|508

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

Small ribosomal subunit protein bS22, mitochondrial

Chain AL

Small ribosomal subunit protein uS15m