HL_9S7E_001

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AAACCAUU

Length

8 nucleotides

Bulged bases

9S7E|1|A|A|1724, 9S7E|1|A|A|1727

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7E_001 not in the Motif Atlas

Geometric match to HL_9E6Q_006

Geometric discrepancy: 0.1091

The information below is about HL_9E6Q_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02262.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

36

Unit IDs

9S7E|1|A|A|1722
9S7E|1|A|A|1723
9S7E|1|A|A|1724
9S7E|1|A|C|1725
9S7E|1|A|C|1726
9S7E|1|A|A|1727
9S7E|1|A|U|1728
9S7E|1|A|U|1729

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

Large ribosomal subunit protein bL9m

Chain M

Large ribosomal subunit protein uL15m

Chain X

Large ribosomal subunit protein bL28m

Chain i

Large ribosomal subunit protein mL51