HL_9S7E_064
3D structure
- PDB id
- 9S7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACUCAUCCU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S7E_064 not in the Motif Atlas
- Homologous match to HL_7U2J_104
- Geometric discrepancy: 0.18
- The information below is about HL_7U2J_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9S7E|1|Ax|A|31
9S7E|1|Ax|C|32
9S7E|1|Ax|U|33
9S7E|1|Ax|C|34
9S7E|1|Ax|A|35
9S7E|1|Ax|U|36
9S7E|1|Ax|C|37
9S7E|1|Ax|C|38
9S7E|1|Ax|U|39
Current chains
- Chain Ax
- P-site tRNA (Visualisation example)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- Small ribosomal subunit protein uS9m
- Chain Az
- mRNA (Visualization example)
Coloring options: