HL_9SS0_017
3D structure
- PDB id
- 9SS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit RimM-KO with IF1 and IF3 (State I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9SS0|1|D1|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9SS0_017 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.1746
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9SS0|1|D1|G|786
9SS0|1|D1|A|787
9SS0|1|D1|U|788
9SS0|1|D1|U|789
9SS0|1|D1|A|790
9SS0|1|D1|G|791
9SS0|1|D1|A|792
9SS0|1|D1|U|793
9SS0|1|D1|A|794
9SS0|1|D1|C|795
9SS0|1|D1|C|796
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AJ
- Small ribosomal subunit protein uS11
- Chain AT
- Small ribosomal subunit protein bS21
- Chain F3
- Translation initiation factor IF-3
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