HL_9SUM_009
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 9SUM|1|A|G|273, 9SUM|1|A|A|274, 9SUM|1|A|A|275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_63894.5
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 25
Unit IDs
9SUM|1|A|U|268
9SUM|1|A|U|269
9SUM|1|A|U|270
9SUM|1|A|G|271
9SUM|1|A|G|272
9SUM|1|A|G|273
9SUM|1|A|A|274
9SUM|1|A|A|275
9SUM|1|A|U|276
9SUM|1|A|G|277
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain N
- 60S ribosomal protein L13
- Chain P
- Ribosomal protein L15
- Chain S
- 60S ribosomal protein L18-A
- Chain c
- 60S ribosomal protein L28
- Chain q
- 60S ribosomal protein L44
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