HL_9SUM_016
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GUGAAAAAC
- Length
- 9 nucleotides
- Bulged bases
- 9SUM|1|A|A|635, 9SUM|1|A|A|637
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_18470.6
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9SUM|1|A|G|632
9SUM|1|A|U|633
9SUM|1|A|G|634
9SUM|1|A|A|635
9SUM|1|A|A|636
9SUM|1|A|A|637
9SUM|1|A|A|638
9SUM|1|A|A|639
9SUM|1|A|C|640
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain F
- 60S ribosomal protein L4-A
- Chain N
- 60S ribosomal protein L13
- Chain P
- Ribosomal protein L15
- Chain a
- Ribosomal protein L24
Coloring options: