HL_9SUM_026

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GGAUGAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9SUM|1|A|G|1095
9SUM|1|A|G|1096
9SUM|1|A|A|1097
9SUM|1|A|U|1098
9SUM|1|A|G|1099
9SUM|1|A|A|1100
9SUM|1|A|A|1101
9SUM|1|A|C|1102

Current chains

Chain A

25S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain I

60S ribosomal protein L7

Chain g

60S ribosomal protein L32

Chain h

60S ribosomal protein L33-A