HL_9SUM_031

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GUUAAACC

Length

8 nucleotides

Bulged bases

9SUM|1|A|C|1492

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67772.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9SUM|1|A|G|1486
9SUM|1|A|U|1487
9SUM|1|A|U|1488
9SUM|1|A|A|1489
9SUM|1|A|A|1490
9SUM|1|A|A|1491
9SUM|1|A|C|1492
9SUM|1|A|C|1493

Current chains

Chain A

25S rRNA

Nearby chains

Chain C

5.8S ribosomal RNA; 5.8S rRNA

Chain J

60S ribosomal protein L8

Chain P

Ribosomal protein L15

Chain l

Ribosomal protein L37