HL_9SUM_034

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GUUUUCUUU

Length

9 nucleotides

Bulged bases

9SUM|1|A|U|1627

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22758.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

9SUM|1|A|G|1620
9SUM|1|A|U|1621
9SUM|1|A|U|1622
9SUM|1|A|U|1623
9SUM|1|A|U|1624
9SUM|1|A|C|1625
9SUM|1|A|U|1626
9SUM|1|A|U|1627
9SUM|1|A|U|1628

Current chains

Chain A

25S rRNA

Nearby chains

Chain T

Ribosomal protein L19

Chain W

60S ribosomal protein L22