HL_9SUM_036

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CCUUG

Length

5 nucleotides

Bulged bases

9SUM|1|A|C|1736, 9SUM|1|A|U|1737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90436.6

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

9SUM|1|A|C|1735
9SUM|1|A|C|1736
9SUM|1|A|U|1737
9SUM|1|A|U|1738
9SUM|1|A|G|1739

Current chains

Chain A

25S rRNA

Nearby chains

Chain D

60S ribosomal protein L2-A

Chain r

60S ribosomal protein L43