HL_9SUM_048
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9SUM|1|A|A|2537, 9SUM|1|A|C|2544
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.4
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9SUM|1|A|U|2533
9SUM|1|A|A|2534
9SUM|1|A|A|2535
9SUM|1|A|A|2536
9SUM|1|A|A|2537
9SUM|1|A|C|2538
9SUM|1|A|G|2539
9SUM|1|A|A|2540
9SUM|1|A|U|2541
9SUM|1|A|A|2542
9SUM|1|A|A|2543
9SUM|1|A|C|2544
9SUM|1|A|G|2545
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 60S ribosomal protein L10
- Chain V
- 60S ribosomal protein L21-A
- Chain d
- 60S ribosomal protein L29
Coloring options: