HL_9SUM_050

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CAAAAGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52651.5

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

33

Unit IDs

9SUM|1|A|C|2593
9SUM|1|A|A|2594
9SUM|1|A|A|2595
9SUM|1|A|A|2596
9SUM|1|A|A|2597
9SUM|1|A|G|2598
9SUM|1|A|G|2599
9SUM|1|A|G|2600

Current chains

Chain A

25S rRNA

Nearby chains

Chain G

60S ribosomal protein L5

Chain L

60S ribosomal protein L10

Chain V

60S ribosomal protein L21-A

Chain q

60S ribosomal protein L44