HL_9SUM_061

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9SUM|1|A|A|3094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9SUM|1|A|C|3092
9SUM|1|A|U|3093
9SUM|1|A|A|3094
9SUM|1|A|C|3095
9SUM|1|A|G|3096
9SUM|1|A|G|3097

Current chains

Chain A

25S rRNA

Nearby chains

Chain K

60S ribosomal protein L9-B

Chain O

Large ribosomal subunit protein eL14 domain-containing protein

Chain Q

60S ribosomal protein L16-B