HL_9SUM_076

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GAUGAUUC

Length

8 nucleotides

Bulged bases

9SUM|1|CA|U|238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67772.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9SUM|1|CA|G|232
9SUM|1|CA|A|233
9SUM|1|CA|U|234
9SUM|1|CA|G|235
9SUM|1|CA|A|236
9SUM|1|CA|U|237
9SUM|1|CA|U|238
9SUM|1|CA|C|239

Current chains

Chain CA

18S rRNA

Nearby chains

Chain ZD

40S ribosomal protein S11-A

Chain w

40S ribosomal protein S4

Chain y

40S ribosomal protein S6