HL_9SUM_091

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9SUM|1|CA|C|1091
9SUM|1|CA|G|1092
9SUM|1|CA|C|1093
9SUM|1|CA|A|1094
9SUM|1|CA|A|1095
9SUM|1|CA|G|1096

Current chains

Chain CA

18S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain p

Small ribosomal subunit protein eS32

Chain r

60S ribosomal protein L43