HL_9SYH_069
3D structure
- PDB id
- 9SYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from deltaRlmE strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.89 Å
Loop
- Sequence
- CGACGGUUG
- Length
- 9 nucleotides
- Bulged bases
- 9SYH|1|a|A|1453, 9SYH|1|a|C|1454
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9SYH_069 not in the Motif Atlas
- Geometric match to HL_8B0X_064
- Geometric discrepancy: 0.0492
- The information below is about HL_8B0X_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_00557.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9SYH|1|a|C|1451
9SYH|1|a|G|1452
9SYH|1|a|A|1453
9SYH|1|a|C|1454
9SYH|1|a|G|1455
9SYH|1|a|G|1456
9SYH|1|a|U|1457
9SYH|1|a|U|1458
9SYH|1|a|G|1459
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain m
- Large ribosomal subunit protein bL17
Coloring options: