HL_9SYR_008

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

9SYR|1|L1|G|294, 9SYR|1|L1|A|295, 9SYR|1|L1|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|289
9SYR|1|L1|U|290
9SYR|1|L1|U|291
9SYR|1|L1|G|292
9SYR|1|L1|G|293
9SYR|1|L1|G|294
9SYR|1|L1|A|295
9SYR|1|L1|A|296
9SYR|1|L1|U|297
9SYR|1|L1|G|298

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L36a

Chain LH

60S ribosomal protein L15

Chain LP

Large ribosomal subunit protein eL13

Chain Lr

60S ribosomal protein L27a