HL_9SYR_092

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

AUUGAUAGCU

Length

10 nucleotides

Bulged bases

9SYR|1|S1|U|1300, 9SYR|1|S1|G|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|A|1295
9SYR|1|S1|U|1296
9SYR|1|S1|U|1297
9SYR|1|S1|G|1298
9SYR|1|S1|A|1299
9SYR|1|S1|U|1300
9SYR|1|S1|A|1301
9SYR|1|S1|G|1302
9SYR|1|S1|C|1303
9SYR|1|S1|U|1304

Current chains

Chain S1

18S rRNA

Nearby chains

Chain Sa

40S ribosomal protein S15

Chain Sp

40S ribosomal protein S29

Chain Sr

Ubiquitin