3D structure

PDB id
9T0Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome from delta-9 strain
Experimental method
ELECTRON MICROSCOPY
Resolution
1.87 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
9T0Y|1|A|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T0Y|1|A|G|786
9T0Y|1|A|A|787
9T0Y|1|A|U|788
9T0Y|1|A|U|789
9T0Y|1|A|A|790
9T0Y|1|A|G|791
9T0Y|1|A|A|792
9T0Y|1|A|U|793
9T0Y|1|A|A|794
9T0Y|1|A|C|795
9T0Y|1|A|C|796

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
Transfer RNA; tRNA
Chain K
Small ribosomal subunit protein uS11
Chain U
Small ribosomal subunit protein bS21
Chain X
mRNA
Chain Z
Transfer RNA; tRNA
Chain a
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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