HL_9T1A_001

3D structure

PDB id

9T1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-RlmE strain, PTC class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

UUUUGUAUAA

Length

10 nucleotides

Bulged bases

9T1A|1|a|A|574

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T1A|1|a|U|566
9T1A|1|a|U|567
9T1A|1|a|U|568
9T1A|1|a|U|569
9T1A|1|a|G|570
9T1A|1|a|U|571
9T1A|1|a|A|572
9T1A|1|a|U|573
9T1A|1|a|A|574
9T1A|1|a|A|575

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain k

Large ribosomal subunit protein uL15

Chain q

Large ribosomal subunit protein bL21

Chain z

Large ribosomal subunit protein bL32