HL_9T4R_070

3D structure

PDB id

9T4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S initiation complex with a natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CGAUUGGAUUG

Length

11 nucleotides

Bulged bases

9T4R|1|a|U|1498, 9T4R|1|a|U|1499, 9T4R|1|a|U|1504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T4R|1|a|C|1495
9T4R|1|a|G|1496
9T4R|1|a|A|1497
9T4R|1|a|U|1498
9T4R|1|a|U|1499
9T4R|1|a|G|1500
9T4R|1|a|G|1501
9T4R|1|a|A|1502
9T4R|1|a|U|1503
9T4R|1|a|U|1504
9T4R|1|a|G|1505

Current chains

Chain a

23S rRNA

Nearby chains

Chain m

Large ribosomal subunit protein bL17