HL_9T5X_031
3D structure
- PDB id
- 9T5X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GUUCGGGAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T5X_031 not in the Motif Atlas
- Homologous match to HL_4V9Q_214
- Geometric discrepancy: 0.1707
- The information below is about HL_4V9Q_214
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9T5X|1|Y|G|32
9T5X|1|Y|U|33
9T5X|1|Y|U|34
9T5X|1|Y|C|35
9T5X|1|Y|G|36
9T5X|1|Y|G|37
9T5X|1|Y|G|38
9T5X|1|Y|A|39
9T5X|1|Y|C|40
Current chains
- Chain Y
- A-site tRNA-Pro
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- Small ribosomal subunit protein uS12
- Chain X
- mRNA
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
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