HL_9T5X_036
3D structure
- PDB id
- 9T5X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 9T5X|1|a|G|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T5X_036 not in the Motif Atlas
- Homologous match to HL_7A0S_001
- Geometric discrepancy: 0.5072
- The information below is about HL_7A0S_001
- Detailed Annotation
- Pseudoknot with intercalation
- Broad Annotation
- No text annotation
- Motif group
- HL_17803.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9T5X|1|a|U|59
9T5X|1|a|G|60
9T5X|1|a|C|61
9T5X|1|a|U|62
9T5X|1|a|A|63
9T5X|1|a|A|64
9T5X|1|a|U|65
9T5X|1|a|C|66
9T5X|1|a|U|67
9T5X|1|a|G|68
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 6
- Protein translocase subunit SecY
- Chain s
- Large ribosomal subunit protein uL23
- Chain x
- Large ribosomal subunit protein uL29
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