HL_9T5X_064
3D structure
- PDB id
- 9T5X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GUGAAAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T5X_064 not in the Motif Atlas
- Homologous match to HL_7A0S_032
- Geometric discrepancy: 0.1724
- The information below is about HL_7A0S_032
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
9T5X|1|a|G|1281
9T5X|1|a|U|1282
9T5X|1|a|G|1283
9T5X|1|a|A|1284
9T5X|1|a|A|1285
9T5X|1|a|A|1286
9T5X|1|a|A|1287
9T5X|1|a|G|1288
9T5X|1|a|C|1289
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 6
- Protein translocase subunit SecY
- Chain m
- Large ribosomal subunit protein bL17
- Chain r
- Large ribosomal subunit protein uL22
- Chain z
- Large ribosomal subunit protein bL32
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