HL_9T61_017
3D structure
- PDB id
- 9T61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Doxycycline Bound C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- GAUUAGAGACC
- Length
- 11 nucleotides
- Bulged bases
- 9T61|1|A|G|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T61_017 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.1524
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9T61|1|A|G|783
9T61|1|A|A|784
9T61|1|A|U|785
9T61|1|A|U|786
9T61|1|A|A|787
9T61|1|A|G|788
9T61|1|A|A|789
9T61|1|A|G|790
9T61|1|A|A|791
9T61|1|A|C|792
9T61|1|A|C|793
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain Y
- Transfer RNA; tRNA
Coloring options: