HL_9T61_033
3D structure
- PDB id
- 9T61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Doxycycline Bound C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T61_033 not in the Motif Atlas
- Homologous match to HL_5J8B_109
- Geometric discrepancy: 0.0814
- The information below is about HL_5J8B_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9T61|1|Y|G|31
9T61|1|Y|C|32
9T61|1|Y|U|33
9T61|1|Y|C|34
9T61|1|Y|A|35
9T61|1|Y|U|36
9T61|1|Y|A|37
9T61|1|Y|A|38
9T61|1|Y|C|39
Current chains
- Chain Y
- P-site tRNA-Met
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- Small ribosomal subunit protein uS9
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